Insertion junction: CLIP2.028777_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028777
Chromosome:chromosome 3
Location:4774030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177800 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTAGCCTGCGCGTCTTCACCTACGCTCCACGCGCTGCTGTCCGCCTT
Internal bar code:ACTTCCTCCATTGTTTATGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3344
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTTGGGAGTCCAGCTG
Suggested primer 2:TCACTTGCTGACGCTCCATT