Insertion junction: CLIP2.028782_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028782
Chromosome:chromosome 9
Location:4529734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801058 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGCGGCGTTCCACCCACAGCCAAATGCAGTAGCTCGGGCGGGGCTC
Internal bar code:GTCGTTCCCGGATCTGTTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2620
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCCAGCTCTGCAATAC
Suggested primer 2:CCGCCAGTCATACGTATGCT