Insertion junction: CLIP2.028785_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028785
Chromosome:chromosome 17
Location:172121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697050 (1 of 4) PF13911 - AhpC/TSA antioxidant enzyme (AhpC-TSA_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCAGACGAGGGGAGCGGGGTACTACACGCATGCAGTGAGGTCGGCGC
Internal bar code:TAATAATATCGGATGACAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAACCCCCTACATCGAC
Suggested primer 2:TCAAGTCGCTTGTTTGCTGC