Insertion junction: CLIP2.028790_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028790
Chromosome:chromosome 3
Location:4780577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTCCCACTCCCCCTCCTTTGTGCTCCCTTCTCCTCCCTTCTCCTCC
Internal bar code:TCCGCATATGCGTTGGCAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:771
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACACCCTAGGTCACGGG
Suggested primer 2:CGACGCGCTGAAGAGATTTG