Insertion junction: CLIP2.028800_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028800
Chromosome:chromosome 6
Location:7378931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300050 OPR27 OctotricoPeptide Repeat protein 27 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGATGTTGTGCAGAACGTTAGCAATCACGCCCCGACAGATTACGCTA
Internal bar code:CAGTTTAGACAAAGTCGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:856
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTCGCTGAGTTGATGT
Suggested primer 2:GGCTGTTTTACCCTCCTCCC