Insertion junction: CLIP2.028801_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028801
Chromosome:chromosome 6
Location:6068029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800713 (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTCTGATGGAGCCCCAACTGCAGCCCTGGTCGTCTGTTTGCACGTGC
Internal bar code:GCGCTGTGCTGAGTATATCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2987
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACGCTGATCATGGTGCT
Suggested primer 2:TTCACGACTACCTCTCCCCC