Insertion junction: CLIP2.028805_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028805
Chromosome:chromosome 12
Location:7957031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552851 OGT1 (1 of 1) PTHR23083//PTHR23083:SF397 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED; O-linked N-acetylglucosamine transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTTAACGCGCGGATTAACTTACTGGCCTGCCCCTTGTTACCCATGGG
Internal bar code:TCGGCCTATATTGGACAGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGCCATCTCGTACATGA
Suggested primer 2:GTGAGTGAGTGAGTGGGTGG