Insertion junction: CLIP2.028815_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028815
Chromosome:chromosome 12
Location:6452147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537500 (1 of 1) PTHR11200//PTHR11200:SF136 - INOSITOL 5-PHOSPHATASE // PHOSPHOINOSITIDE PHOSPHATASE SAC1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCGCCACTGCCGCCACTGCCGCCGTATCGGGATCGCTCTGTAGAGA
Internal bar code:ACTGTTTTTACTGGATGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:366
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACACACACACTCTCTCT
Suggested primer 2:GTACAACCCCATCAGCGTGA