Insertion junction: CLIP2.028816_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028816
Chromosome:chromosome 1
Location:5429231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038300 (1 of 10) PF02536 - mTERF (mTERF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATACTTACCCAGCGCACATGCACAGCCACCCTGCATTGGCTAGCGCA
Internal bar code:AGTATGCTATCATAGGCATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:920
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCCGATTGTTCCCCAA
Suggested primer 2:AGGACAGGAGGTGGCATACT