Insertion junction: CLIP2.028823_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028823
Chromosome:chromosome 17
Location:3567065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCTGCTGCTGCCGCCGCTGCTCCTGCACTTGCTGCGCCTGCTGCAT
Internal bar code:TCTTTAGCAAACTATTATATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTTTGGATGCGTGTGCT
Suggested primer 2:GAAGCAAGTGCAGCAAACGA