Insertion junction: CLIP2.028823_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028823
Chromosome:chromosome 17
Location:3567066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCAGCAGCAACAGCAGGCCAACCAGCAGCAGCAACAGCAAGGCGGC
Internal bar code:TCTTTAGCAAACTATTATATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCAAGTGCAGCAAACGA
Suggested primer 2:GGTTTTTGGATGCGTGTGCT