Insertion junction: CLIP2.028831_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028831
Chromosome:chromosome 16
Location:4488160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667700 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTATGTTACTAATTCCATGGGCCACATGGCTTGCTCAATGCTCGCAAT
Internal bar code:CCATAACTGGATTAAAGCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:421
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGGGGGTAAGGAGCTG
Suggested primer 2:GTTTGTGGCCTTGCAGTCTG