Insertion junction: CLIP2.028831_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028831
Chromosome:chromosome 16
Location:4488161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667700 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTCTGAAACAAGACCCTTCTGCCACCTGTGTGATCCCGCAGCCGCGG
Internal bar code:TGGTACGAATGAACAGTTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1042
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTGGCCTTGCAGTCTG
Suggested primer 2:CACAAGGGGGTAAGGAGCTG