Insertion junction: CLIP2.028833_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028833
Chromosome:chromosome 3
Location:7932970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGCCGCCATACTCGCCACCCGTGGCCGCCACCACAGCGCGCGCCTTC
Internal bar code:GTTTGTCGATCAATTGTATCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4002
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGTTTCGAAGCGCCCT
Suggested primer 2:CGGCTTTTGTTGGTGATGCA