Insertion junction: CLIP2.028835_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028835
Chromosome:chromosome 1
Location:5731200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041050 AOC6 Cationic amino acid transporter; (1 of 2) K03294 - basic amino acid/polyamine antiporter, APA family (TC.APA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGAGGTGGGATGAGGTGGGATGGCTTGCTGGTGTGGGATGTCGGGAGC
Internal bar code:ATAGCTACGTCAATCCTAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTGGCAAAGCAGCACAT
Suggested primer 2:ACCACCGTCTACCTCACGTA