Insertion junction: CLIP2.028861_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028861
Chromosome:chromosome 13
Location:4682572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604050 (1 of 1) IPR002048//IPR006626//IPR011050 - EF-hand domain // Parallel beta-helix repeat // Pectin lyase fold/virulence factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGTATTCTTAACACACGTGTAACATTACTTACACGCACCCAAAAAAA
Internal bar code:TGCGTCTTGGTAATTGAGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCCCCCTCAACTGATT
Suggested primer 2:ACACACACACACACAGACGT