Insertion junction: CLIP2.028864_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028864
Chromosome:chromosome 5
Location:1114293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248150 PGA2 1-acylglycerophosphocholine O-acyltransferase; (1 of 3) 2.3.1.25 - Plasmalogen synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCATCTTCGACGCCCTGGGCGCACAGCCAGCCATTGGATGGCTGAGAA
Internal bar code:AGGATCTAGTGATGCGCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2440
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGGGTTGTCAAGGTGG
Suggested primer 2:CTCTGTCACGTGTTCCTGCT