Insertion junction: CLIP2.028876_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028876
Chromosome:chromosome 12
Location:5774513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532700 (1 of 1) IPR000104//IPR007308 - Antifreeze protein, type I // Protein of unknown function DUF408 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATAGCCCTCCACCGCGCCCGCCGCCGCCACCGCCGCCGCCGCCGCTG
Internal bar code:TTTTAACATGATATGATGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1060
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGACGGAGATGAAAAGA
Suggested primer 2:CGGCATTGAGAACTCCACCT