Insertion junction: CLIP2.028880_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028880
Chromosome:chromosome 11
Location:1831328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACCACTCACCCCCACCCTCTTCCCGCCTGCCCCTCTTCACACACACA
Internal bar code:AAAAGATATGTACCTCTACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTGGGTGGGTTTGGGT
Suggested primer 2:CTGCTGCCTTGTCCAAACAC