Insertion junction: CLIP2.028882_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028882
Chromosome:chromosome 7
Location:1902541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325744 (1 of 1) PTHR19277//PTHR19277:SF102 - PENTRAXIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCTTGTGGCGCCCGCCGCGCCCTCAGCCGAGTCGAAGCAGCCGCCG
Internal bar code:GGCTATAAGTTAATGTCGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTGGGGCTTGCTTGGAG
Suggested primer 2:TGGCACAGAGAAGTGTAGCG