Insertion junction: CLIP2.028884_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028884
Chromosome:chromosome 17
Location:3627165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725301 (1 of 3) IPR000504//IPR003954 - RNA recognition motif domain // RNA recognition motif domain, eukaryote intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAACCACGAAAGCCGACGACTTGCATGTCACCCACCTGTCCCCGCCGT
Internal bar code:TCCAGAAAGGTGTAACGCAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4506
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCGCACCAACTGAAGAC
Suggested primer 2:TCCCGCTCGCAATCTTCTTT