Insertion junction: CLIP2.028894_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028894
Chromosome:chromosome 3
Location:6156524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190900 (1 of 5) PTHR10351:SF42 - LD40663P CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGTGGAGGACGCCATGAGTAAGTATTGTTCAGGGATAACAGCGGCGA
Internal bar code:ACGCTAGCCTTCTCGGACGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAACTTCTCCACCTCGTGCA
Suggested primer 2:TTCAGCGGCATCTTCTTCGT