Insertion junction: CLIP2.028901_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028901
Chromosome:chromosome 3
Location:3374043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166400 (1 of 2) IPR002591//IPR017849//IPR017850 - Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase // Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTAGGGCAGTGCACCCTCCCTCCCTACCCGTACCCCAACAGCATTGA
Internal bar code:CACGCGTTGTTCGGATCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:616
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACTACTCACGATTCGGG
Suggested primer 2:AGGCCACACACTTCACCAAA