Insertion junction: CLIP2.028914_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028914
Chromosome:chromosome 3
Location:5238485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182050 LCS1 (1 of 4) K01897 - long-chain acyl-CoA synthetase (ACSL, fadD); Long-chain acyl-CoA synthetase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAGGTGCTGTCGTGGGAGGAGCTGGTCACCACCGGCAAGGAGGCAGC
Internal bar code:ATACCACAGACATGTATTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGAGGGGCCCATCTTCT
Suggested primer 2:CCCGGATGGAAGTAGTGAGC