Insertion junction: CLIP2.028920_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028920
Chromosome:chromosome 9
Location:4106221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399252 CDS
Cre09.g399289 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCTGCGTGTGAGTGGAATAGGGTGCCGCTGGCCGGCCGATGCCAGC
Internal bar code:TATTTAACATGGTTCCCACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2004
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTTCAGCATCGATCCAC
Suggested primer 2:TGTGTGGACATTACGTGCGA