Insertion junction: CLIP2.028929_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028929
Chromosome:chromosome 13
Location:3388361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586700 FXL2 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCATCCTGATTGTCAGTCCGCTGGCAGTTGAGCACGTAGATTCGCTGC
Internal bar code:TTTTATTCTTTATTAGAACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2565
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGACTAAATGTGGCCCTG
Suggested primer 2:GCCTCGGGAAACAGGAATCA