Insertion junction: CLIP2.028932_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028932
Chromosome:chromosome 9
Location:4069085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399067 (1 of 1) PTHR10641//PTHR10641:SF524 - MYB-LIKE DNA-BINDING PROTEIN MYB // ATMYB1 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCATAGTCGCCAACCGCAACCCTCCGCATCATCCATCCCCTCCCCCC
Internal bar code:CTCTGCTTTTTTTTATGGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTCCATTTCACGCTGCG
Suggested primer 2:GCTACAGCCCAGGTCGATAC