Insertion junction: CLIP2.028932_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028932
Chromosome:chromosome 9
Location:4069091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399067 (1 of 1) PTHR10641//PTHR10641:SF524 - MYB-LIKE DNA-BINDING PROTEIN MYB // ATMYB1 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGCGAGCAACTGGAACATCGGGTGCAGGTGTGGGCGCGGGTTACGG
Internal bar code:CTCTGCTTTTTTTTATGGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACAGCCCAGGTCGATAC
Suggested primer 2:CATCTCCATTTCACGCTGCG