Insertion junction: CLIP2.028943_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028943
Chromosome:chromosome 10
Location:1113497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425400 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTCCGTGGCGGCAGCGGCAGCGGCAGCGGCAGCAGAAGCGCTTCCAC
Internal bar code:TTTTAAGTGTATTCTGGAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4090
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGATGTGTTTGTGGTGG
Suggested primer 2:ATCGCCAACTGATTCACGGT