Insertion junction: CLIP2.028968_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028968
Chromosome:chromosome 15
Location:800328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637750 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGTCGCGGGGTCGGGCGTTCTGGAGAACGTCAAGCTCGCTGCCATG
Internal bar code:TCATGCACGATTCTACGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:953
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAATCGTGTTGAGCAGCG
Suggested primer 2:CGTGCCGTATTGCAAGTAGC