Insertion junction: CLIP2.028974_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028974
Chromosome:chromosome 11
Location:3802871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479350 (1 of 3) PTHR31563//PTHR31563:SF1 - FAMILY NOT NAMED // ION CHANNEL POLLUX-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCTTGATCTTGTAGTCATCGCTGAGCACCAGGATCTGGTCGCCCAC
Internal bar code:CAGACGGTATCAGCGTCTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:746
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTCTCTCATCCCCTGAC
Suggested primer 2:GTTGAGTGAGGACGCAGACA