Insertion junction: CLIP2.028984_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028984
Chromosome:chromosome 9
Location:3451552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00132499

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATGCAGCCAGTGCCCGGGCTACCCGGGCAGGAGGCACTCAGTACACA
Internal bar code:ACCCGGACAACAGCGTACATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3610
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCGTACAGGATTGTGCT
Suggested primer 2:ATCCCCGGTCATAGGTTGGA