Insertion junction: CLIP2.028991_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028991
Chromosome:chromosome 3
Location:2966444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163050 (1 of 2) K09955 - hypothetical protein (K09955) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTATTACTGGCTCATGCAGCAGGCAGTCGATCGGTGATGCATGGCTC
Internal bar code:ATCGTCGAGTCCCCGGGAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2184
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATCCCTGCTTTTCCTCT
Suggested primer 2:CCTTGCATCGCATTGTACCG