Insertion junction: CLIP2.028992_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028992
Chromosome:chromosome 17
Location:5012715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735850 (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGACGTGACACCTGCTCCCCGCCCAATTGCCGCCATTGCCCGCAAGG
Internal bar code:AGAGCACGGCAGGTAAGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1850
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCGAGTTCGTGTTTGTT
Suggested primer 2:CAACCCAACACCAAGCTTCG