Insertion junction: CLIP2.029013_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029013
Chromosome:chromosome 17
Location:166609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697000 (1 of 2) PTHR23155:SF401 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTCCACCAACTCGCTCAGCGAGCTGCCGCCCTGGCTGCCCGCCTGCG
Internal bar code:CTGGTCGGGACTTGTAGATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:213
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCAGCCACCTTTATCA
Suggested primer 2:TCACCGCTACATGTCCCCTA