Insertion junction: CLIP2.029017_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029017
Chromosome:chromosome 11
Location:2021386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCGATGGACGAATGGCGGACCGGCGCGATTGCTCCCAGGAATGGGCG
Internal bar code:CCCTGATAAGATTTGCAGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1546
LEAP-Seq percent confirming:72.4138
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGTAGCAAGATGGCCAC
Suggested primer 2:GGATCTCTGCAGAGCGAGTC