Insertion junction: CLIP2.029020_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029020
Chromosome:chromosome 3
Location:8233706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200050 CAL1 (1 of 2) PF13202//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calpain family cysteine protease CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGAAGAGGACAGATGGGCGTGTTTAGCGACCCGCCCGCCCGTCAGGGA
Internal bar code:CATACGAACGTTGGCTAACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:7124
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGACTGTCAACGTGCAC
Suggested primer 2:ATGGAGGGCATGCGTTTGTA