Insertion junction: CLIP2.029032_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029032
Chromosome:chromosome 10
Location:651305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421950 TEF26 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754); Predicted protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCACCCGGCTTAAGAAGGTGGGGGCGGCCGCATGCCAAGCCCGCGC
Internal bar code:TCGGTTAGTGATCGCGTACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGGTGCAAACCAGGTGT
Suggested primer 2:CGGGTGCTACTGTGTCTGTT