Insertion junction: CLIP2.029035_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029035
Chromosome:chromosome 12
Location:4979875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524900 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype CDS
Cre12.g524950 ENGB,ENGB1 Factor possbly involved in ribosomal 50S subunit assembly; (1 of 1) PTHR11649//PTHR11649:SF49 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAATGCATAAGGGAAGCGCAGGCCCATGCAGAAAATTTGCACAGTGTC
Internal bar code:AGTTGTCTTTCAGTAGACTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3133
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCCGAGGAGCCTGATGG
Suggested primer 2:TCACTTGCAGCTCCGTCAAT