Insertion junction: CLIP2.029049_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029049
Chromosome:chromosome 2
Location:2802522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094350 (1 of 1) PTHR23316//PTHR23316:SF30 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED; Importin Alpha 1b intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGGTTCTGCATCGGCAGTATCTGCCAATGGGGCCTCATCTACTGCT
Internal bar code:GAGATAGGTGTCGTGATATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1768
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCAAGTGCATCAGTGAT
Suggested primer 2:AGTGCTTTGCGTTGGAACAC