Insertion junction: CLIP2.029050_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029050
Chromosome:chromosome 3
Location:3045189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGGTATCTACAAACCCACCCTGAGGTTTGTCATCTGCGCCAGGGC
Internal bar code:GTCGATTCCTCAGTCTCAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTGTCAAAGCACAGGCC
Suggested primer 2:TACCGTTGTGGCTGTAGCTG