Insertion junction: CLIP2.029051_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029051
Chromosome:chromosome 5
Location:1096015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248050 (1 of 1) IPR012889 - L-fucose isomerase, N-terminal-2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGAGAAGGTGGGTGGGGTTGCGGGGGTGCGGGCACTGGGGTGGGTGGA
Internal bar code:AGTCCGTGTTGTACCAACGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:348
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCCCTCCTCAAACACC
Suggested primer 2:GGCAAAGCTTTTGGTCAGGG