Insertion junction: CLIP2.029054_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029054
Chromosome:chromosome 1
Location:1752985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009700 PPP1 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGAGCTCACGGCGCTGGGCGTCGCTGCTGTTGACCATGACGGCATC
Internal bar code:CGTCTTGTCCTTAATCATTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1806
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAAGCACAGCATGACAG
Suggested primer 2:TATAATACACCCCGCACGCC