Insertion junction: CLIP2.029063_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029063
Chromosome:chromosome 2
Location:6142726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119800 (1 of 1) PF00097//PF00498 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // FHA domain (FHA) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCGATGCAGCATCAGGCAACGACCCAGCGCCGCCGCGGCCTCCAGGC
Internal bar code:CGGACGCTGACTATAGTGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1557
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTCCGAGGATTTCAGCC
Suggested primer 2:GACACACGGAGAGTTGGAGG