Insertion junction: CLIP2.029070_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029070
Chromosome:chromosome 12
Location:5875417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533500 (1 of 7) PF00211//PF13416 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_8) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCTGCACACGCGCCAACACATCTCCCCACGCATCGACCTTCACGGG
Internal bar code:GGCGGCGGATTCCTTAAAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2007
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GATACTGCGGATGACCCTGG
Suggested primer 2:CACTACAAGCGCGTCATGTG