Insertion junction: CLIP2.029072_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029072
Chromosome:chromosome 9
Location:605669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800984 (1 of 2) IPR002156//IPR009056//IPR012337 - Ribonuclease H domain // Cytochrome c-like domain // Ribonuclease H-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGAAATCGGTTACAGCTCCGACGTTCGCCATTTGGACAAGCGGGAAG
Internal bar code:GCTTGGAGAGGCCATAGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1915
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AATCAGCCGGGACTCACTTG
Suggested primer 2:TGCACCACAACGACTCCTAC