Insertion junction: CLIP2.029074_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029074
Chromosome:chromosome 3
Location:5888721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188550 HEL20 (1 of 1) K14806 - ATP-dependent RNA helicase DDX31/DBP7 [EC:3.6.4.13] (DDX31, DBP7); DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAATGCGAGGTGCGTGGCGTCGCGCGTGTGGCTGTGGGGGCGGGTTCT
Internal bar code:ACCCCTAGTCTTGTGGAAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCACCCCAACAAACAG
Suggested primer 2:CTCGGGCACAGATGACTTGT