Insertion junction: CLIP2.029082_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029082
Chromosome:chromosome 2
Location:921780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079100 XPA1 DNA repair protein; (1 of 1) K10847 - DNA-repair protein complementing XP-A cells (XPA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGAGTTGGTGTGTGGTAGATCCCAGAACATCAGGAGCTGCCCCACGA
Internal bar code:CGTAGGGCTGCCCAGGGGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:378
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGCGCTCATGTTGAT
Suggested primer 2:GGCAGCACACAACGTCAAAT