Insertion junction: CLIP2.029091_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029091
Chromosome:chromosome 16
Location:3933441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689376 (1 of 2) PTHR11805:SF1 - CYSTEINE-RICH PDZ-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAACACCTGTTTTTAGCGATGATGATGTCGCATTTTTTGGGCTGAGC
Internal bar code:AGTTATTCTGTGCTTGGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2739
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGGCCTGTGAAAAGAA
Suggested primer 2:TCGGAGTGTACGTTGTGGTG