Insertion junction: CLIP2.029095_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029095
Chromosome:chromosome 2
Location:843725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078858 PSN1 Presenilin protease; (1 of 1) K04505 - presenilin 1 (PSEN1, PS1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCCCGTGCGGCGGTTGCGAGCGAGTGTATGTGACCGCTCCTGTGGCC
Internal bar code:CGTATGTGCTTAAGTGCGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2208
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTAGGACAACGGCCTCT
Suggested primer 2:ACTGCCTATGGTCCAAGCAC